rs108260764 SNP Detail

Summary

• ID
  rs108260764
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147298087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAGGTCAG AGCAGCTGTT
  GGGCTGGGAA ATGGGCAGGA GAAGAACAAG GTGTGGGCAG GGGTTTATTT TCTCCTGCCA
  CTCTCACAAT TCTGTCATGG ATATCTTACC ATTTTGGAGA AGTTTGAGAT ACTATGAACC
  TGGGGGTTTT GGTGATGTTT TAATTAATTT TATAAGTTCC AGAATATTTT TCTATTTTTT
  W
  AAAGATTTAT TTATTATTAT ATCTAAGTAC ACTGTAGTTG TCTTTTAGAT ACACCAGAAG
  AGGGCATCAG ATCTCATTAC AGATGGTTGT GAGCCATCAT GTGGTTGCTG GGATTTGAAC
  TCAGGACCTT CGGAAGAGCA ATCAGTGCTC TTAACCACTG AGCCATCTCT CCAGCCCAAG
  AATATTTTTC TAAAATAACC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147942986	ENSMUSSNP2864578	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108260764					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147298087 () rs orientation: forward

Symbol	Name	Function Class
Rr377375	regulatory region 377375	1019 bp downstream
Rr398768	regulatory region 398768	1524 bp upstream