rs108271679 SNP Detail

Summary

• ID
  rs108271679
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:68831986 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTACTCACA TGCCTATAAT CCCAGCAATG AGGTTGAGTC
  AGGACAAACA TGAAATATTG CATCCTGGAC TATGCGACTA TGCAGTGAAA CACTAACTCA
  W
  CAAAGAAAAA AAGAGACAGG AAGGGAGGTG GACATCAGGG GTCTCCATTT CCTCCCTTAC
  TCTTGGCAAT GCATAGTTAA TGATAGAAGG GATGGATGG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss139660953	ENSMUSSNP6572902	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108271679					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:68831986 () rs orientation: forward

Symbol	Name	Function Class
Rr296117	regulatory region 296117	692 bp distal
Tssr126359	transcription start site region 126359	239 bp downstream