rs108286602 SNP Detail

Summary

• ID
  rs108286602
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:39253056 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATAAAGGA AGAAAGGGCT
  GAACAAATAT GGAAGAGTTA TAGTGAAATG AGTTTAATTG TTGTAACTGA ATGCTTCCGC
  ATCCATGGAG AGCTTTCAGG TCTGGTGAAT ATTACCTTTT AGAGACACTG TGGCTGGTTC
  AAAAAGAAAA CGGCCCACCT CATTGCTCGT AACGTGTCTG AGTCTTGGAA AGTATGCACT
  K
  GGAGGAAGGC AGGAATAATA TGCACCGAGA GTGTCTATAT CCACATCACA TGCCTACTTC
  CTTATTGCCC TCAACCTACA GCTCTTGGAG TCCTCCAGAG TCTCAATTCC AAGGTAAGTT
  ATACAAAAGA AAGAGTGAAA AGGTGTGTTT GTGAAAATAA AAACAGATTT GTAGGCAGCT
  AGACTATCCG TTCATGCTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148902889	ENSMUSSNP884687	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108286602					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:39253056 () rs orientation: forward

Symbol	Name	Function Class
Gm60523	predicted gene, 60523	64 bp upstream
Rr388296	regulatory region 388296	233 bp upstream