rs108287563 SNP Detail

Summary

• ID
  rs108287563
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:21766439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGATAGGC TTGTACCATG
  TATGCTGCAG AGCTTTGGGA GGCTGTGAGA GGCGGCCAGC AGAATTCTGA GGAACTACTA
  CAGTGTAGCT GCCAGTTTCA CACTGGGGAG GACAGAAGAT GGGCTCCTTC CTGTTCAAAG
  AGCTTCTCGA GGTCAAGGTC AGACAGTGAG AAGAGGAAGA TGGAAGCAGG GCAGGAAGAC
  T
  AAAAACTCAA GGTTATCCTC ATTCATAGTG AGTCTGGGAC AGACAAGTCA GTCTCACAAA
  ATGAAGAAGT ACTTGCTAGC GGTTCCCCTA TACAGTGATC AAAGTGTCAA AGGATTGAGA
  GAAAGAAAGA AAAAAAGTCA AACGCTAGCA ATCATGCCAA TGGAATATTG TTTTTCTTAG
  GCAGAAGTAG GTAGCCTGAA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MSM/Ms
ss146950446	ENSMUSSNP4937105	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	MSM/Ms
rs108287563					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:21766439 () rs orientation: forward

Symbol	Name	Function Class
Rr428788	regulatory region 428788	940 bp distal
Sgk1	serum/glucocorticoid regulated kinase 1	within coordinates