rs108288179 SNP Detail

Summary

• ID
  rs108288179
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:98770144 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAACACTCA TTCCCCCTGC
  CAACACCTCT CCCCCTCCCC TCGCCCAGCA TACCTGGTCA TTAGGCCCCG CCTTTCCGGG
  GCGGAGCTTC CTTAGAAGGC AGACACATAT AAAGAACTCA AATCCTTTCC CAGTCAACAC
  TTCTGATCAG CTAGTTCTTC TGATTACACC TGCTCTCTCC CAGAGTGCCC AGAGTCGGCT
  R
  TAAAAGCCTC CACACAACAG TTGTACAACC TGCAAGAAGT ACAGCTCTCC GGACCAGCAC
  TTGCATCACA CCTTTTTGGG CACGAACTAC CAACTGCCCA CATCACCCAA AATTGTGGAT
  ATGAAGCCCT GCAGCACCAG CACTGATCCT GAACCCAATC CTGCCGAGTG CCCTCGACTC
  CACCTAGACC AGCCTGCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136842233	ENSMUSSNP4760862	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108288179					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:98770144 () rs orientation: forward

Symbol	Name	Function Class
Gm33700	predicted gene, 33700	120 bp upstream