rs108289727 SNP Detail

Summary

• ID
  rs108289727
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:11187539 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACTTTTTAA AAAGAAATTT AATATTTAAA TAAATGGAAA
  AACACTTTCA ACTCTTAGAA GTTTTAATAG TAGTAACTAA AGCTTCTAAA TTGAGCTACA
  G
  ATCCAGCACA TTCTTAGGGG AGTCCCAGCT GTATTTTTTC CCCATAAGTT GGAAAGCAGA
  TGCTAAAATT CATCTGTAAA TATAAGGGAC ACAAAATAA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss139024271	ENSMUSSNP1290880	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108289727					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:11187539 () rs orientation: forward

Symbol	Name	Function Class
Gapdhrt	glyceraldehyde-3-phosphate dehydrogenase, retrotransposed	283 bp upstream
Mir5124b	microRNA 5124b	243 bp upstream