rs108307263 SNP Detail

Summary

• ID
  rs108307263
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:41290601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGGCCAGA ACTCCTATGT ATGTTCTGTT
  CTGATATCAG TTCAGCCTGA GGCTGTCTGT GTTTGTCCTT TTGGATCATC TAAGTTTGCA
  TGTGGAATTT CTGTGGCAAC TTAATGAACT Atgtctgtct gtctgtctgt ctgtctgtct
  S
  tctctctctc tCACACACAC ACACACAAAT GGCCATTGTT TGTGTAGGTA TCTGTCTTGA
  TGTTCTATTG TTTTGTGCCT TAACCTTAGC TGCTGTTTTG GGTGGTCTTT ATGTGTGTTC
  TTCTGTGAAC AGGTCAACTC CTGATAGCTC                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136353071	ENSMUSSNP299681	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss322925135	CHEV_9_41187388	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs108307263					SNP	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:41290601 () rs orientation: forward

Symbol	Name	Function Class
Mir100hg	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene	within coordinates
Tssr84503	transcription start site region 84503	841 bp downstream