rs108313479 SNP Detail

Summary

• ID
  rs108313479
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:34206168 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTGGGAAA AACATTTGAA GGGGGCTGAG
  CTAGAAACTG GGAATAGTGG CTaggaaaga aattagattt cttgtctctc tcaatctctc
  tctctctcct ctctctttct catccttcct tttctcctat ctagtgatag gggtaaaacc
  Y
  aggggtaaag gataagaaat agaaaccaga aagtagcaaa gaccagctac aggtctctct
  gtgtagctct ggctgccctg gaactcactc tggacaccag gattgtctca aactcagaga
  tctgcctgcc tctgggtgtg tacacaCAGG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325368837	CHEV_17_34124139	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108313479					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:34206168 () rs orientation: forward

Symbol	Name	Function Class
AA388235	expressed sequence AA388235	1836 bp downstream