rs108317152 SNP Detail

Summary

• ID
  rs108317152
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:86233997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCGAGAGT CCCGTCCTAA
  ACTGGGTCCA GGGAACATCA CTGAAAAGGG GCCAGAAAGA TGGCAAGACC TAGAAACTGG
  GGAGAAACCC TTTGAAACAT CTTCCAGCTC TGACATGGCT GATTTAAGAA TGGACACAGA
  CTGTACGCCT ACCCACACAA GACACTGCAC AAAAAGCACA TAAAAATAAG ACATGAAATG
  W
  AAAGGAAGTT AGTGGACTGT GGGGTAGATA AGGAAGGTTA CCCTGGTGGA AGGAACTGTT
  TATGATACAT TATAATACAC ATTTGTTTGT GTGTGTGTGT CTATATATAC ATATGTATGA
  AATTGTCAAA AACTTAAATT ATCAAAAAAG GGAAAGATAG TCCTAATGTC CAGACTTATG
  AGCTCCGTTT GATGAAGTAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325489964	CHEV_17_86325909	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108317152					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:86233997 () rs orientation: forward

Symbol	Name	Function Class
Gm30117	predicted gene, 30117	within coordinates
Rr532331	regulatory region 532331	1735 bp proximal
Rr532332	regulatory region 532332	1967 bp proximal
Tssr149724	transcription start site region 149724	1994 bp downstream