rs108327191 SNP Detail

Summary

• ID
  rs108327191
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170898721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATAGATAGA TATAGATAGA TACCTATACC TTTCATATAT
  GGTTATATGT TCATATATAT GGGTATATAT AAAAGATTAA TGCGTGTGCG TGTGCGTGTG
  T
  GTGTGTGTGT GAAGTGAAAG AAATCGCTAC AGGGGCTTGA AGTGGACGCT CATTTGTGAC
  TATTCGGGAA AGCTGACTGG GCCCATGGGA TGCGTGCGA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss146152361	ENSMUSSNP5534308	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108327191					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170898721 () rs orientation: forward

Symbol	Name	Function Class
Gm56232	predicted gene, 56232	1074 bp downstream
n-TDgtc7	nuclear encoded tRNA aspartic acid 7 (anticodon GTC)	1841 bp downstream
n-TEctc8	nuclear encoded tRNA glutamic acid 8 (anticodon CTC)	640 bp downstream
n-TGtcc5	nuclear encoded tRNA glycine 5 (anticodon TCC)	1182 bp downstream
Rr423202	regulatory region 423202	709 bp distal
Rr423203	regulatory region 423203	444 bp proximal
Rr423204	regulatory region 423204	1327 bp proximal