rs108332572 SNP Detail

Summary

• ID
  rs108332572
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:29820236 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCCACCTGC CTCTGCCTCC CAAGTGTTGG GATTAAAGGC
  ATGTGCCACC ACTGGCCAGC CTTAGCAATT TTTTTTTTCC TAAAGTATTG GGAAAGAAAT
  Y
  TATTTTGAAC AACGTGAGGA AATGGGTTGA AAAATTGACA GAGTCCTGCA CTAAGAACAG
  AGCGAATCAG CTACAAAGTC TAGTACATTT TAAAAATCG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148665874	ENSMUSSNP2290130	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss322131542	CHEV_7_30905830	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs108332572					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:29820236 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18778	CpG island 18778	706 bp proximal
Rr167448	regulatory region 167448	364 bp proximal
Tssr65657	transcription start site region 65657	1104 bp upstream
Zfp382	zinc finger protein 382	1131 bp upstream