rs108349284 SNP Detail

Summary

• ID
  rs108349284
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171181665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGGATCTG ATGCCTTCTT
  CTAGCCTCTT TGGGTCCCAG GCATGCACAT AGCAGACCTA TACATACAGG TAAGTCACAT
  AAAAATAAAT CTTGGGGGGG AAATCTTTAT AAAAATAAGT TTTTGAAAGA TCTCGTATGT
  GTAAATAATA AGAATATAAA GAGCTCTATG TAGTAATACG AAGTGATGTT GATTTAGAAA
  W
  TAATTTAATT AATTTCTAAA TCAACATCCT TCGTATTATT AATTAATTAA TTAATTAATT
  TAATTAAATG GGGCTATTTC AGAGGGGAAC TTTACATACA CTATGATTTA ATAGGGTAAA
  GAGACTCTCA ACATTGACTA GTCTATCCCT GTTTACATGA GACTATTGAG GTTTGGTCTG
  TTGCTGTGTA TTGCAATGCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss119999711	PARCsnp_1.02124	PARC_SEQ	INBRED	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs108349284					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171181665 () rs orientation: forward

Symbol	Name	Function Class
Gm37154	predicted gene, 37154	29 bp upstream
Pfdn2	prefoldin 2	within coordinates
Rr423296	regulatory region 423296	1444 bp proximal
Rr423297	regulatory region 423297	1698 bp proximal
Rr423298	regulatory region 423298	1796 bp proximal