rs108357110 SNP Detail

Summary

• ID
  rs108357110
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:77041291 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAATTCCA GGACTTAGAG
  GAAGTGATGG AGAAGAGTAT CAGAGAAGCC CTGGGCCATC AGGAGAGGCT GAAAGCTGAG
  CATCGACACA GAGCCAAGAT TCTCAAGCTA ACGCTTCCAG AGGCAGAGCA GCGGCAGCAA
  TAGCAGCAGC ATCGTGTGAA GCAGCCAGAG CAAGAGCAGC TTCTGAAGGA GGAAGGCCAG
  R
  TCTGGCTGGG AGTCATGAAA GTGCAGAGAT GGAGTTGTAG ACCTGCAGGC TGGGGACAGT
  GTCTAGCCCA GGCAGGGCCA GGGTACAAAG CACGGGGGGC GGGGGGGGGG GGGGGGACCA
  GCTTGTCCTA GCAGAGATGA TTCTGTCCTT GACTTGTTGG ATGCAGGCTC AGTGGCGAAT
  GTGGCTGGGA GCACAGAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss144722396	ENSMUSSNP5862888	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs108357110					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:77041291 () rs orientation: forward

Symbol	Name	Function Class
Gm70876	predicted gene, 70876	within coordinates
Tfdp1-ps	transcription factor Dp 1, pseudogene	1216 bp upstream
Tssr7562	transcription start site region 7562	1212 bp upstream