rs108358460 SNP Detail

Summary

• ID
  rs108358460
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:21789965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTAACAAC TCTCCCGGTT
  GCAAATTCTT GAACCTGGAT GCAATAAGCT CATGTATTCT TCCTTCCCCC TTTACAATGT
  GGGGAGAATT TTTCTTGTAA AATGCAAGGT TTCAATGTTT TTAACCTGAC CTATATCAGT
  GGTGAAAATT CTAGATGCTT ATTGGTAAGA ATTTATGAAT GTATGTGGAC ATTGTGAAAT
  G
  ATTAGGTTGG GAAAGCATCA TATCTGTCTT CTCAGGTGTT TATAATTTTG TTATGGTGAA
  ACACCTAAAT TCTACTGTAC TAAGTGTTTT GAAATACATA ATCCATTAAT ATTTACAACA
  TGTTGTTGTG TAATAATTCA CCAAACTCAT TACTCCTAAC TAAATGTAAT TTTGTACCCA
  GTGACCAACC TTGCCAGAAT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148818649	ENSMUSSNP3926951	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs108358460					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:21789965 () rs orientation: forward

Symbol	Name	Function Class
Defa5	defensin, alpha, 5	1574 bp downstream
Gm65300	predicted gene, 65300	within coordinates