rs108363398 SNP Detail

Summary

• ID
  rs108363398
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183833635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGCCTAAA ATCTAGAACC
  ATATTTGTGA GCCTTGTAGT TTACTCCACA GATAACTCCA GAGTGGCTCC ATTCAACAAA
  TAGTCTGAGA GATCCCAGCT TGGCGTTAAC TCGGTTGCAT CTGGCTAAGC AGCATATGAT
  CTGCAGCCAG CTCTCTTGGG AAACTGTCTT GATGTCCCAG GACACCGAGG TTTCCTTGAT
  Y
  TTATCAGGGG TGCACCTGCA AGATGCCAGC CCTGCAAAGG TCATTTAAGA AGTACTTGCA
  AGTAGCTACT CCTCACACTG GGGCTACACA TGCAAAGTTA AGAGTTAATT TTGAAGACAT
  GAAGGGGATC TCCACCGAGG CTGTGGTTAG GGACCCTTCC TTTCTCTCTC TCTTTCCACC
  CCTTTTGCCT ACCCCGTATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146417496	ENSMUSSNP6703722	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108363398					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183833635 () rs orientation: forward

Symbol	Name	Function Class
Rr425178	regulatory region 425178	within coordinates