rs108364950 SNP Detail

Summary

• ID
  rs108364950
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70440579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CATTCCGGAT CACTGGCACC TGTGGGGAGG GGCCAGGAGC
  GGCAAGCTCA GGGCCCAGAG GCTCCACAGG AGTTCCACTG GGAAGGAATG GCCTCCTGGG
  G
  AAGTTTCGGA GGCTCTTAGG AGCTTCCTTC AGACTGTCTT CCCTCCTTAT ATTGTCGATC
  CACGGCTCCC CCCACCTGGC CTGCTAGTGT CCCATCAACT G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss139681780	ENSMUSSNP2464319	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108364950					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70440579 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm26908	predicted gene, 26908			289 bp upstream
Rr494880	regulatory region 494880			979 bp proximal
Rr494881	regulatory region 494881			1483 bp proximal
Sorbs3	sorbin and SH3 domain containing 3			Intron
				Noncoding-Transcript-Variant
Tssr126403	transcription start site region 126403			264 bp upstream
Tssr129550	transcription start site region 129550			278 bp downstream
Tssr129551	transcription start site region 129551			325 bp downstream
Tssr129552	transcription start site region 129552			337 bp downstream