rs108365148 SNP Detail

Summary

• ID
  rs108365148
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110243898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGATCCAG CTGCTCTGGC GGCCACAGGT CCCGCGACCG
  AGGGACTCCC TGGGCAGAGC ATCCTGCCAG GACAGCAGAA ACCAGGTGGT GAGGGCGGGC
  R
  CCTACCTGGG CGCCCTCTGG GCTACTTGAG GTCGACTTTT CCGGACAAGT TCCATGGCTA
  ATGGAAAGTG GTCTGACTGT GCTCACCCTC CCGAGACGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss138688741	ENSMUSSNP5313484	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108365148					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110243898 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5110	CpG island 5110	within coordinates
Dio3	deiodinase, iodothyronine type III	1766 bp upstream
Dio3os	deiodinase, iodothyronine type III, opposite strand	within coordinates
Mir1247	microRNA 1247	584 bp downstream
Rr472865	regulatory region 472865	1225 bp distal
Rr472866	regulatory region 472866	within coordinates
Rr472867	regulatory region 472867	615 bp proximal
Rr472868	regulatory region 472868	720 bp proximal
Tssr115195	transcription start site region 115195	1764 bp upstream
Tssr117772	transcription start site region 117772	1468 bp downstream
Tssr117773	transcription start site region 117773	1494 bp downstream