rs108365222 SNP Detail

Summary

• ID
  rs108365222
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:34200351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CGCCCCCACA TTCGCCGTTA CAAGATGGCG CTGACAGCTG
  TGTTCTAAGT GGTAAACAAA TAATCTGCGC ATGTGCCAAA GGTAGTTCTC CACCCCATGT
  G
  CTCTGCCTTC CCCGTGACTA CAACTCGGCC ATGGGCTGCA GCCAATCAGG GAGTGATACG
  TCCTAGGCGA AGGATAATTC TCCTTAAAGA GGGACGGGGT T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148847405	ENSMUSSNP3282891	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108365222					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:34200351 () rs orientation: forward

Symbol	Name	Function Class
AA388235	expressed sequence AA388235	117 bp upstream
Cpgi9020	CpG island 9020	within coordinates
Gm4152	predicted gene 4152	619 bp upstream
Gm53998	predicted gene, 53998	77 bp downstream
Rr330866	regulatory region 330866	850 bp proximal
Rr339661	regulatory region 339661	1950 bp distal
Rr339662	regulatory region 339662	within coordinates
Rr392547	regulatory region 392547	within coordinates