rs108369497 SNP Detail

Summary

• ID
  rs108369497
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:111882807 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTCAGCGT TTGGAAGCTG
  ATTATGGGAT GGATCCCCGG ATATGGCAGT CTCTAGATGG TCCATCCTTT TGTCTCAGCT
  CCAAACTTTG TCTCTGTAAC TCCTTCCATG GGCGTTTTGT TCCCAATTCT AAGAAGGGAA
  CAATTCCCAA TTCTAAGAAG GGAAAGTGTT CACACTTTGG TCTTCTTCTT GAGTTTCCTG
  T
  GGTTAGCAAA TTGTATCTTA TATCTTGGGT ATCCCAAGTT TCTGGGCTAA TATCCACTTA
  TCAGTGAGTA CATATTGTGT GAGTTCTTTT GTGATTGGAA CCTTTCTATT AGTATGAGAT
  TCCATTAAAA AAAAAAAAAA AGCCAAAATA CCAGTTAACT TTTGTTCAAA AACTTTTATT
  TACTATAAAG ACAAAACACC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145218829	ENSMUSSNP4758771	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs108369497					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:111882807 () rs orientation: forward

Symbol	Name	Function Class
Map3k1	mitogen-activated protein kinase kinase kinase 1	155 bp downstream
Rr486184	regulatory region 486184	1309 bp distal
Rr486185	regulatory region 486185	715 bp distal
Rr486186	regulatory region 486186	624 bp proximal
Tssr124031	transcription start site region 124031	1950 bp downstream