rs108373233 SNP Detail

Summary

• ID
  rs108373233
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:26807376 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAATCAGGGA GGAGAGGGGA TGGTATAGAA TGGAAAACAT
  CTGGTCTAAC TAGTTACATA TCAACCTATC TGTTACCGAT CAATCCTGGT CCCATAGCAG
  Y
  TACATGATGT AAGGATGCAG CCAGTGACAG TCATAGTGGA ATGCAGGAAA ACAATGAGGA
  TTTCACATTG TCCCACCATT TTACCACCTA CTACTTTGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss137448315	ENSMUSSNP5913140	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss323954158	CHEV_12_27442242	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs108373233					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:26807376 () rs orientation: forward

Symbol	Name	Function Class
Rr259939	regulatory region 259939	176 bp distal
Rr266884	regulatory region 266884	826 bp proximal