TGTCTACCTC TGCCTCCCAA GTGCTGGGAT TAAAGGCATG TGCCATCACT GCCCCGCTCC CTAATTGGTT CTTGATTGTG TCAATAAAAA AGGCAGAAGC T AACTGTTGGG TGAAGGGAAA AAGGTGGGAC ATCTGGGTTG CAGGAGCAAG TGAAGGGGAT GCAGAGAGAA AGAGGATTTG GACCAGAGTG GATGGAGAT T = T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | DBA/2J |
---|---|---|---|---|---|---|
ss146018979 | ENSMUSSNP3081815 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T |
SNP Consensus Information | ||||||
SNP | Consensus Type | DBA/2J |
||||
rs108378881 | SNP | T |
Location: Chr1:166230187 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pogk | pogo transposable element with KRAB domain | Intron | ||||||
Rr422579 | regulatory region 422579 | 914 bp distal | ||||||
Rr422580 | regulatory region 422580 | 246 bp distal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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