rs108379118 SNP Detail

Summary

• ID
  rs108379118
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:76474519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGA AAGAAACAAA CAAACAATAA
  C
  AACAACAACA AACCCCTGAT GTCAC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147535811	ENSMUSSNP6573367	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss325700415	CHEV_18_76501102	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108379118					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:76474519 () rs orientation: forward

Symbol	Name	Function Class
Gm58741	predicted gene, 58741	1918 bp upstream
Rr347326	regulatory region 347326	519 bp distal
Rr355557	regulatory region 355557	1520 bp distal
Tssr151998	transcription start site region 151998	1607 bp upstream