rs108382442 SNP Detail

Summary

• ID
  rs108382442
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:89314665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCAAGAA AAGTGACCAA
  AGGAATGTCA ACACATCACA TGGGGGAGGG GAAGGCACAT CTGAGAAAAA ACATCCAATA
  CGCGGCCTTG GAGAGTTTGA TTCTATATAA CCCAGAATAT AGTTGATTCC TGTAAGCATT
  TTGATATATT AATGAAATGA TGCTAATTGA TTAACAAAAT CGTTGTCTCT GTTTTAATCA
  M
  AGCCAAACAT ACAGTACAGA CATGGACTCC TGAACGGGAC TCTGCTGCCC TCTGTAGGTC
  ATCACCATCA CCTGCATGCT CAGTGTCGAC CAGGCACTAG TGTTACCCTT GGTGGATGAA
  TGTCTTGCTT GAGCCTTTGC CAACTTTGGG CCGACTTTGG GCAGTATCTC CTCAGGGAAC
  GTGTAGACAG AGGCCAATAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148517972	ENSMUSSNP4928541	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108382442					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:89314665 () rs orientation: forward

Symbol	Name	Function Class
Rr319439	regulatory region 319439	within coordinates
Rr324507	regulatory region 324507	within coordinates