rs108384703 SNP Detail

Summary

• ID
  rs108384703
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:156313288 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCATCTCAG CACCCTGCAT AGACCTGGCC AGAAGGGCCT
  GCTCTGTATA CACCCGCACA CTTGTATTCA GACTGGAGGA GCCTAGACGT TGGAGTTCTA
  K
  GGAGGCAGGG ATTCTCCAGT TGCCCCTCCC CTGCCAGGGT GCACACATCC TGTTTCCACA
  CGAGTCCCAG CTGTCTGAGT CACTGGTGAC TGTCGGGGG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148128847	ENSMUSSNP4894671	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321446051	CHEV_4_155602940	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs108384703					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156313288 () rs orientation: forward

Symbol	Name	Function Class
Klhl17	kelch-like 17	504 bp downstream
Mir7658	microRNA 7658	1228 bp downstream
Plekhn1	pleckstrin homology domain containing, family N member 1	mRNA-UTR
Rr606703	regulatory region 606703	within coordinates
Rr606704	regulatory region 606704	258 bp distal
Tssr45022	transcription start site region 45022	293 bp upstream
Tssr45023	transcription start site region 45023	261 bp upstream
Tssr45024	transcription start site region 45024	22 bp upstream