rs108395399 SNP Detail

Summary

• ID
  rs108395399
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45176051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTAAT CTTTGTGTGT GGGTATGTAT
  R
  TCTGATGTGT GTGCACACGC ATGTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136408180	ENSMUSSNP947654	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss322942723	CHEV_9_45072836	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108395399					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45176051 () rs orientation: forward

Symbol	Name	Function Class
Il10ra	interleukin 10 receptor, alpha	within coordinates
Mir7086	microRNA 7086	1890 bp downstream
Tssr84758	transcription start site region 84758	129 bp upstream
Tssr89253	transcription start site region 89253	1814 bp upstream
Tssr89254	transcription start site region 89254	1745 bp upstream
Tssr89255	transcription start site region 89255	1685 bp upstream
Tssr89256	transcription start site region 89256	1654 bp upstream
Tssr89257	transcription start site region 89257	563 bp upstream
Tssr89258	transcription start site region 89258	519 bp upstream
Tssr89259	transcription start site region 89259	502 bp upstream