rs108406289 SNP Detail

Summary

• ID
  rs108406289
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128678430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGA GTGCCCACAC TTCTTCCAGA
  A
  GACTTGAGTT TGGTTCCCAG CACCC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss145468775	ENSMUSSNP4626846	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss319966915	CHEV_1_130647270	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs108406289					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128678430 () rs orientation: forward

Symbol	Name	Function Class
Gm29599	predicted gene 29599	233 bp upstream
Gm70593	predicted gene, 70593	within coordinates