rs108414041 SNP Detail

Summary

• ID
  rs108414041
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84708778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTGTAGTC CAGGCTGGCC TCATACTCAC AGAGGTCTGC
  CTGACTCTGC TCCCACGTGC TAGGTTTAAA GGCACATGCT ACCACTGCCC GAAGTTCTTT
  W
  AAAATTTTTT AAAACCTTTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGTGTGTGGT TGGCCAACAA GCATAACCA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss145368215	ENSMUSSNP3507815	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss322746885	CHEV_8_86506048	CHEVERUD	SCREENING_POP	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs108414041					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84708778 () rs orientation: forward

Symbol	Name	Function Class
Prkaca	protein kinase, cAMP dependent, catalytic, alpha	within coordinates
Rr666367	regulatory region 666367	1263 bp proximal
Rr666368	regulatory region 666368	1423 bp proximal
Tssr78321	transcription start site region 78321	1597 bp downstream
Tssr78322	transcription start site region 78322	646 bp upstream