rs108416081 SNP Detail

Summary

• ID
  rs108416081
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:27482326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ACTATTACAC CCTGAGAATG GGAGTGACTA GGAGTGAATT
  CAGTCTCGCA CCTGCGTACA AGGCTTGTTT ACTAGTTTGG CACAGCGGAG GCCCGCGCCA
  W
  CTTATAATGG CGATTGCTCG TGGCACACAC GGCTCTCCTC AGAGATTACT GGCAGCACGC
  ACGAGATTGC TCGCAGCACG TACAGGCTCT CCACATATTG G                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss148807177	ENSMUSSNP4495325	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs108416081					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:27482326 () rs orientation: forward

Symbol	Name	Function Class
Gm70420	predicted gene, 70420	within coordinates
Rr371030	regulatory region 371030	within coordinates