rs108417345 SNP Detail

Summary

• ID
  rs108417345
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32906129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTGGAGT TGACTAGTCC
  CTGCTCTGCA GACCTTTTGC ACAGTTGGAA CTGCAGACCT ATCCAAGTTT TGTTTTCATT
  CTGTTGCTGT GATAAAACAC TGACCAAAAG TGACCTCAGG AGGAAAAAGT TTGTTTGAGG
  GTAGTCAAGG TAGGAACTCC AGCAGGAACT TGAGACAGAA AGCGTGGAGA AACACTGCCC
  R
  TTTGCTCACT CTCAAGCACA TGTTTAGCTA GCTTTTGAAA AATACAGTCC AGAACTATCT
  GTGCAGAAAA TGGTGACAGG TAGAATGGCT GGGTGCTTCT AAATCAACTA ACAATTAAGA
  CAGTCCCCCA AAGATGTGCC CACAGACCAC TCTGATCTGG CAGTACCATG CAACTGAGAC
  TCCCTTCTCA GGTGAGTAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362854	CHEV_17_32824100	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108417345					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32906129 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	within coordinates
Rr337381	regulatory region 337381	1386 bp proximal
Rr339615	regulatory region 339615	within coordinates
Rr341335	regulatory region 341335	472 bp proximal
Tssr143733	transcription start site region 143733	1559 bp downstream
Tssr143734	transcription start site region 143734	1540 bp downstream
Tssr143735	transcription start site region 143735	1512 bp downstream
Tssr143736	transcription start site region 143736	1478 bp downstream
Tssr143737	transcription start site region 143737	1049 bp downstream