rs108425286 SNP Detail

Summary

• ID
  rs108425286
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44477688 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAT TAAATGAGTG TTGATCCAAC
  A
  GACAAATTTT AGATGCAAAG GAAGA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322941144	CHEV_9_44374474	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108425286					SNP	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss136397293	ENSMUSSNP5763230	ENSEMBL	ENSEMBL_Sanger	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44477688 () rs orientation: forward

Symbol	Name	Function Class
Rr195037	regulatory region 195037	888 bp distal
Rr206319	regulatory region 206319	487 bp distal
Tssr2844	transcription start site region 2844	1394 bp downstream
Tssr89174	transcription start site region 89174	1323 bp downstream
Tssr89175	transcription start site region 89175	1372 bp downstream
Tssr89176	transcription start site region 89176	1718 bp downstream