rs108433029 SNP Detail

Summary

• ID
  rs108433029
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:85321045 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      A TATGGTGCTG GAGAAGAAGA AGCTGAGAGT TCTACATCTT
  GATGTGCGGG CAGCAGAAGG AGCTTATGTG TCATAGTGGG TGTAGCTTGA GCATGTATAA
  C
  CTCAAAACCC ATCTTTACAG TAAAACCCCA CCTCCAACAA GGCCACACAC ACTCCAACAA
  GGTCACATCT CCTAATAGTG CTACTTCCTA TGAGCCAAGC A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145027174	ENSMUSSNP6103420	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108433029					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:85321045 () rs orientation: reverse

Symbol	Name	Function Class
Gm7281	predicted gene 7281	1238 bp upstream
Gm16025	predicted gene 16025	709 bp downstream
Rr414358	regulatory region 414358	904 bp distal