rs108437991 SNP Detail

Summary

• ID
  rs108437991
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:120103258 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      T TGCTAACAGG AACAGGATAT CCTTCCGTTA ATTATATCTA
  ATGCTATAAT TAGAGCAATG AAAGATTCAC AAATGTGATT ATATCAAAAA TCCCTGAGTC
  S
  CACTTTAAAG TGATGAGTTC TGGTGTGTAG ACACTAATTG TAGTTGTTTA TTAATACACT
  GATTTTCTAA AATCACTTGT TCTTCTAACT ACTAATTCTC C                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136155491	ENSMUSSNP2646010	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108437991					SNP	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:120103258 () rs orientation: reverse

Symbol	Name	Function Class
Ccl28	C-C motif chemokine ligand 28	within coordinates
Rr270687	regulatory region 270687	1858 bp distal
Rr270688	regulatory region 270688	658 bp distal
Rr270689	regulatory region 270689	943 bp proximal
Rr282566	regulatory region 282566	772 bp distal
Rr282567	regulatory region 282567	543 bp proximal