rs108445459 SNP Detail

Summary

• ID
  rs108445459
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:58993671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GTGGCATGTG AGATGACTGC AAAACAACAG AAAAGACATT
  GTCATGAGCA AGGTGCGATC CTTGCAGAAA TGCCCAAGGT TCCATTGTGG GACTAGGTGC
  T
  TGTTGGCATG CAGTGTTTGC CAACCAATGT GCACCCTAGA TGTCCACATT TCCTCTCATG
  GGAAACAGGG CAAGGGCATC TGAGGACTTC AGGGAAGTCA C                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss144661054	ENSMUSSNP5831745	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs108445459					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:58993671 () rs orientation: forward

Symbol	Name	Function Class
Del(7Ube3a-Snrpn)1Alb	Deletion, Chr 7, Beaudet 1	within coordinates
Gm24966	predicted gene, 24966	150 bp downstream
Gm25499	predicted gene, 25499	1629 bp upstream
Snhg14	small nucleolar RNA host gene 14	within coordinates