rs108447441 SNP Detail

Summary

• ID
  rs108447441
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:48215662 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      A AAATTAATCC TGGAGACTGG CACAGACTTA CTTGGTACTC
  CTTCCCCTTG CCCTATTTAA AACTGAGAAT ACTCCCTCTT GATTCAGTTT TACTCTTTTT
  A
  AGATCCTTTA TGGGGCTCCT ATGCCCATCA CTGTCTTAAA TAATGTGTTT AAACCTATGT
  TGTTATAATA ATGATCTGTA TACTAAGTTA AAAGGCTTAC A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss133938914	ENSMUSSNP18295	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs108447441					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:48215662 () rs orientation: reverse

Symbol	Name	Function Class
Nxpe4	neurexophilin and PC-esterase domain family, member 4	within coordinates
Rr195312	regulatory region 195312	462 bp distal
Rr195313	regulatory region 195313	739 bp proximal
Rr209369	regulatory region 209369	428 bp distal
Rr383325	regulatory region 383325	within coordinates