rs108453791 SNP Detail

Summary

• ID
  rs108453791
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:45857581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTTTTTGT TTGTTTGTTT
  GGTTGGTTGG TTGTTTGGTT GGTTGGTTTT TACCACTACA CATTCGTTTG CTCCTTAAAA
  TAAAATGGGG GGATACACCT ACTTCATAGG TTTGCTGTAA GAATTAAATA AACCGTTTTA
  AGCCTGTACG TGCCTGAAGC TAGGTTCTGT TGGTGTTTGT TGTTATTACT GGATACCCAG
  R
  GGGGCTCACT GCTGTCTCCT GCTCCCTCAC GGGCAGAGAG AAAGGCAGGC AATAGGAGAA
  ACCTCCTTCG TCTTGAACAG CCTGTGCTCC CCCACAGCCC CTCACCTGGG TAGTAGTATA
  GGCATCTCCA TTGCGGTATC GGGTGACCTG TCGAGTTCGT CGGACGTAGT GATAACTGAT
  GGCCTTCCAC CAGATGCAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325403376	CHEV_17_45683604	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108453791					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:45857581 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9190	CpG island 9190	474 bp distal
Cpgi9191	CpG island 9191	149 bp proximal
Cpgi9192	CpG island 9192	1900 bp proximal
Rr527421	regulatory region 527421	1038 bp proximal
Rr527422	regulatory region 527422	1390 bp proximal
Tmem151b	transmembrane protein 151B	within coordinates
Tssr5128	transcription start site region 5128	896 bp downstream