rs108454194 SNP Detail

Summary

• ID
  rs108454194
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:19279402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GTGTGTGTGT GTGTGTGTGT GTGTGTTTGT GTGTGTGTGT
  GTGTGTGTTT GTGTGTGTGT GTGTGTGTTT GTGTGTGTGT GTGTGTTTGT GTGTGTGTGT
  T
  TGTGTGTGTG TGTTTGTGTG TGTGTGTGTT TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGTGTGGCAG ATAGCAGTTT ATGCAGAACT TCATAATTGA T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss146077840	ENSMUSSNP1920341	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs108454194					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:19279402 () rs orientation: forward

Symbol	Name	Function Class
Cngb3	cyclic nucleotide gated channel beta 3	1448 bp upstream
Rr106676	regulatory region 106676	1956 bp proximal
Tssr36572	transcription start site region 36572	1460 bp upstream
Tssr36573	transcription start site region 36573	1508 bp upstream
Tssr36574	transcription start site region 36574	1518 bp upstream