rs108456142 SNP Detail

Summary

• ID
  rs108456142
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170897904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCCACACCC CCCCAGCCCC ACCCGCCCGT TTGGGAGCCT
  GCTAGGGTAG GCTGCCCCCC CCCCGCCTCC CCCCACCCCC ACCCTCCGCC CCACGCGCAC
  C
  CCCCGGTGTC TGTTTCGCAC AGCCTTCTCT CCTTACACGG CTGCCCCGAG GCCGGCCGCA
  CAGTCCCTTC TGGATGCCCT TTCGGACTGG TGCCCCCTG                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss146152348	ENSMUSSNP1003317	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108456142					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170897904 () rs orientation: forward

Symbol	Name	Function Class
Gm56232	predicted gene, 56232	1891 bp downstream
n-TEctc8	nuclear encoded tRNA glutamic acid 8 (anticodon CTC)	1457 bp downstream
n-TGtcc5	nuclear encoded tRNA glycine 5 (anticodon TCC)	1999 bp downstream
Rr423202	regulatory region 423202	87 bp proximal
Rr423203	regulatory region 423203	1261 bp proximal