rs108458993 SNP Detail

Summary

• ID
  rs108458993
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165430736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAGGGAATC TAACCAGGAC CTGGTCCCAG CATACCAAGA
  AAGAAAAGCA AGAAATGGTG GGGGCGGGAG AGAGGTAAGA ACAGCAGCAA CCATGGTGCC
  M
  GGCAGGCAGG ACCCAAGGAA TATCTTCCTG CCCACTTTAT TAACCGCAAG CGAGAACCAC
  CGTCTAAAGC ATTACTATTG GCCTAGCCTC ATGCTGAGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146003125	ENSMUSSNP5891858	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108458993					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165430736 () rs orientation: forward

Symbol	Name	Function Class
Mpzl1	myelin protein zero-like 1	within coordinates
Rr422396	regulatory region 422396	4 bp proximal
Tssr14771	transcription start site region 14771	1207 bp upstream