rs108463893 SNP Detail

Summary

• ID
  rs108463893
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:134684780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ATTCGCTCTT TTTTTTTTTT TTTTTTCCGA GACAGGGTTT
  CTCTGTGTAG CCCTGGCTGT CCTGGAACTC ACTATGTAGA CCAGGCTGGT CTCAAACTCA
  G
  AAATCGCCTG CTCTGCTTCC CAAGTGCTGG GATTAAAGGC GTGCGCCACT ACGCCCAGCT
  CGCTCTCTCT TCTTGCTTGC TCCGTTGGAG CTCTCAGACA C                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss144508956	ENSMUSSNP567708	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108463893					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:134684780 () rs orientation: forward

Symbol	Name	Function Class
Limk1	LIM domain kinase 1	113 bp downstream
Rr622117	regulatory region 622117	1511 bp distal
Rr622118	regulatory region 622118	1046 bp distal
Tssr53665	transcription start site region 53665	1607 bp downstream