rs108465311 SNP Detail

Summary

• ID
  rs108465311
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18339073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTCTAGCT GAGGATGAAG
  GCCCGAAAAG ACCCTGTCCA AGAAGCTCTG TTGCTTTTGC TACCCATGTA CTCTTCTGCT
  TAGACTGGTT TCAATGACCC CAAGATCCTG GGTGTGCTAG GGCCCCCTGA GTTCACACCC
  AAGATGGCAC GGGGTTAGCG CCAACCAGAA CGAACCTCAG CCAATAGTCA GGCAGGTTTC
  Y
  TTTGTCCCTG TTCCTGCTGG CACAAGACCC TCCAGGATTT TTTGGAGCAG ATGTTGCATT
  CCACTCACCA GGGATCTCAA GATCCTGGGT GTGCTAGGGT GCCTACAGCA TGGAGAGTCC
  TCTAGGGACC TTGGGACCCT CTGTCGAATA CAAGCCCAAG ATGGTGCTTT CTACTTTGGA
  CTTTTAACAT TTGTTCAGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148453505	ENSMUSSNP5100567	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108465311					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18339073 () rs orientation: forward

Symbol	Name	Function Class
Psg23	pregnancy-specific beta-1-glycoprotein 23	1195 bp downstream
Tssr2096	transcription start site region 2096	1890 bp downstream