rs108472198 SNP Detail

Summary

• ID
  rs108472198
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:89314096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCACTAGGC ACTATTATAA
  ATTACATTTA TGAAGAATAG ATGACGCCAC TGACAAACGT TCCTACTATA AGTTACAATG
  CAGCATAAAC CTGGTTATCG AGGCTTTGTC CTCCTTGAAG AAAAGCATTA AGCTGTGTCA
  GTAAATGATA TCATTTTAAG CTAGAAAAGA GGCTGAGATA CAGCATAGGA AAGCCTCCAA
  R
  AGATTTAGAT AGACGATGTG GAAAGTAAGA GGCCCCAGGC ACTGAGAAGG ACCCTGGGCA
  ACCTAGACGT TTCCTGAACT AAGGCACAAG TGAGCTGATT TTTTTTTAAT ATAATGTTTT
  TATTGATTAT TTGGAAACTT CATGTCATCT ACCCAGATCA CATTTTAAGA AAAGAAAGAA
  AGAAAAGAAA AATATCAAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148517913	ENSMUSSNP3462864	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108472198					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:89314096 () rs orientation: forward

Symbol	Name	Function Class
Rr319439	regulatory region 319439	305 bp proximal
Rr324507	regulatory region 324507	528 bp proximal