rs108472481 SNP Detail

Summary

• ID
  rs108472481
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:33024524 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCGGCGAGA CTCTGTCTCA
  AAAAGAAAAA GCTAAAACAC ACACAAAAGG CAAAGCAGAC TTTGGAGGAA AAGAATCATT
  TAATACTACA AAACAGAAAA AAAAGAAGGA AGGAAGGAAG GGAGGGAGGG AGGGAGGGAG
  GGAGGGAGGG AGGGAGGGGA AGGGGAAGGG AGGGGAGGGG AAGAGGAAGG GAGGGGAGGG
  R
  AGGAAGGAAA GAAAGAAAGA AAGGAAAGAA GGAAGAAAGA GGCTAGAGAG ATGACTCTAC
  GAGGCTGTCT GCTCTTCCAG AGGACCTAGG TTTAATTTCT AGTACCACAT TGTGTCTCAT
  AACTGTCTAT AACTATAGTT TCAGATAATC CTATGCCCAT TTCTGGCCCC TACCAGTACC
  AGGCACACAT ATGGTGCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325363788	CHEV_17_32942495	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108472481					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:33024524 () rs orientation: forward

Symbol	Name	Function Class
A930009K04Rik	RIKEN cDNA A930009K04 gene	473 bp downstream
Gm55909	predicted gene, 55909	573 bp upstream
Tssr147401	transcription start site region 147401	148 bp downstream
Zfp811	zinc finger protein 811	within coordinates