rs108472991 SNP Detail

Summary

• ID
  rs108472991
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:61657496 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTGGAGGT GCTGATCATC
  CATCAGCCTT ACTTGATTAG AATCCTTTTC ACTTTCTATT ACATTCAGTA ATAGTAATCC
  AATGGCATGA TTCAGGCAAA CTCAATTCCC TCATACAAAG AGATATTCTG AGATACAGAG
  ATGTTTGTCT TGTGGACAGT GTTGCACTGG TGGATAGGGC AGATTCTCTA CATCTTGTAC
  Y
  GTAATATATG TGACAGGAAG CAGACATTAA ATTTTCCTTC AACTTTGTTT TGTGTGTGAG
  CATCAAAAAG TCTGGGTTTG ACTGAGACCA CAAGGGCCCA TGAGGGGTTA TAAAGTCAGA
  GCCCACCTTT CTTATCACTC CCAGTTTCAG AGAGAGCTCT AGAGAATGGG GCCTCTCTTT
  CTGGAAAGAA AGATCAGAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss149106487	ENSMUSSNP3715228	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss324371739	CHEV_13_61611042	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs108472991					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:61657496 () rs orientation: forward

Symbol	Name	Function Class
Gm47848	predicted gene, 47848	606 bp upstream