rs108480581 SNP Detail

Summary

• ID
  rs108480581
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6404363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAAACTCAC ACTGGCCCTG TCACGTCATT TCTTTATCAC
  ATTATACACA GCAAGCCTTA TTTTTTTGTG AGGCCAAGGA CTAAATCCAA TTCAATTTCA
  Y
  GTTCTACTTT GGCTTCACTG TTTTTCTTTC TTTCTTTCTT TTTTTCTTCT TTTTTTTTTT
  TTTTTTTTTT TTTTTTTTGG TTTTTCGAGA CAGGGTTTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145085246	ENSMUSSNP1483250	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108480581					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6404363 () rs orientation: forward

Symbol	Name	Function Class
Gm2792	predicted gene 2792	within coordinates
Gm17879	predicted gene, 17879	374 bp proximal