rs108482164 SNP Detail

Summary

• ID
  rs108482164
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:35112808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGCATCCC TGTTATATCT
  ACTCTGGGTC ATTCCAGAGC TCAGCATCCC TCCTGACTAG AAGCTGCCTA CATAGTGCAC
  TGCCCTGTGG TGCCAGGTTT TCATGTGCAG CGCCCATAGG ATCAAGCTGG TGCTGAGTCC
  AGGTTCGGTT CTGTTCGGTT GGGAAGCCAT CCCCATCATC CTCATCATCT CTGTTGACCT
  W
  GCAACACCTC TGCAACCACA GTGGAGGGTC CCAATCTCTC TGGTCTGGAC TTTTCTTTCT
  CTCTCTCTAG AAGGCACCTC CCAAGAAACC TTACACTGTG ATTCTAGCCA ATCTAAAAGC
  TGTAAAGTAA ATCCATATGA GGATCCTGGG TTCATTATTC TTAGGACAAG CCTTGGATGT
  AGGACTTAAG TGGCAACTCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148903631	ENSMUSSNP4345289	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108482164					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:35112808 () rs orientation: forward

Symbol	Name	Function Class
D1Mit243	DNA segment, Chr 1, Massachusetts Institute of Technology 243	974 bp proximal
Gm53547	predicted gene, 53547	within coordinates