rs108485418 SNP Detail

Summary

• ID
  rs108485418
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6879048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TTCCAATGTT CATAGTTACA AGTTGTTTTG TTTTTAAAAA
  AAAATGCACA TGGAATCCAT ATTAAAGTAT GAAGTTTAAG AAGACAGGCA GACTGAAGAA
  Y
  GTCTTCCACC CTGGAGTCCG GCCCACACGG ACAGTAACCT GCAGCTCAGA GCGGAAATCT
  GAGTCGGTGC ACAGACGAAG GGGACAGAAG AGGGATGTAC C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145090482	ENSMUSSNP4669757	ENSEMBL	ENSEMBL_Sanger	r	SNP	A	G	A
ss145092645	ENSMUSSNP3086789	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108485418					SNP	T	C	?

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6879048 () rs orientation: forward

Symbol	Name	Function Class
Dynlt1c	dynein light chain Tctex-type 1C	1970 bp downstream
Tmem181c-ps	transmembrane protein 181C, pseudogene	within coordinates