rs108488517 SNP Detail

Summary

• ID
  rs108488517
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:18269360 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGACATATAG TGAGCTAGGA ACATGCTATT AGGATACTAG
  TCCGGCTGTA GTCCTGCCAA TCAAATAAGG ATACATGCTG GTGGTGGATG AGGTTAAAGT
  Y
  CAGATAAGTG AAACACAGAT GGCATCGTTC TCCTGGAAGT GTGAGAGGAA GGCACCAGAG
  CATGGAAAGG CAGAAGTTGA AATTGGGAAG CATGTTTGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137223895	ENSMUSSNP2121282	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108488517					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:18269360 () rs orientation: forward

Symbol	Name	Function Class
Gm40879	predicted gene, 40879	570 bp upstream
Gm58964	predicted gene, 58964	1686 bp downstream