rs108503155 SNP Detail

Summary

• ID
  rs108503155
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:54792122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGAAGCTC TGGTTCTGGG
  GACCCTATGT TCTCCTCTAC CCCACCTCCC CACTTTCTGG CCTCCAGCAA CTGCACTTGG
  AGCAGACAGA CAGATGGGCA GGCAAAAGAG CTCATACAGA GTAAATAAAA AATAAGCAAA
  AAATGTAATA AAAATTTTCA GAATACTCAC TCCTTTCTGC TCCTAAAGCG ACCACCTTTT
  W
  AAAAACAAAA TAACCTACGG GTAAGAGAAC TGCTGTATCC TTTGTCCCTC TTCCATTTCT
  CGGCTATTAC ACACCTTCAC ATTTCTGAAG CACGGCACCA ACATTTATTA GTCCTCACAA
  CATCCCTGTG AGGTAGGTCA ACATGTCCTT TATAGCAGAG AATGGAGAAG CCAGAAGAGG
  CTCTTGCCCA TACCGGATTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137771135	ENSMUSSNP1630167	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108503155					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:54792122 () rs orientation: forward

Symbol	Name	Function Class
Rr260899	regulatory region 260899	522 bp distal
Rr260900	regulatory region 260900	1079 bp proximal
Rr263772	regulatory region 263772	1098 bp distal
Snx6	sorting nexin 6	1002 bp downstream