rs108503567 SNP Detail

Summary

• ID
  rs108503567
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:66963318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTT ATAAAACTTT TACAAATAAT
  R
  TAGGAAGTGT TATTCTCTAT GTACT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145053520	ENSMUSSNP5715045	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss322686815	CHEV_8_69034565	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs108503567					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:66963318 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20395	CpG island 20395	945 bp proximal
Gm63911	predicted gene, 63911	within coordinates
Tktl2	transketolase-like 2	1090 bp upstream
Tssr77575	transcription start site region 77575	1066 bp upstream
Tssr77576	transcription start site region 77576	1085 bp upstream