rs108524899 SNP Detail

Summary

• ID
  rs108524899
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:78240147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TCCAAACATG GAAGTAATTT TGGATTAAGC TTCTCTGCCC
  ATCCCAGCTG TAGTGAATGG GAGTGAGTTC AGCTCAGATT TTTCATTACA ACTGGCTATT
  G
  TTATGTATTT ATATGTCTAT ATGGAAAAAC ATGTTTTTGT CACTTGCAAC TTGGCCAGCA
  CATGCAGTTT GCTCTTGTGA GTGTACATGT TGCTCATGGG A                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss136666884	ENSMUSSNP1742234	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108524899					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78240147 () rs orientation: forward

Symbol	Name	Function Class
Gm70238	predicted gene, 70238	within coordinates
Gsta2	glutathione S-transferase, alpha 2 (Yc2)	Intron
Tssr2946	transcription start site region 2946	440 bp upstream